PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00850.1.p
Common NameEUGRSUZ_E00850, LOC104443982
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 361aa    MW: 40366.5 Da    PI: 5.8542
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00850.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.1e-29131190258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                       dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp+v+eitY+g+H++
  Eucgr.E00850.1.p 131 DDGYSWRKYGQKDILGATYPRSYYRCTYRntqNCWATKQVQRSDEDPTVFEITYRGTHTC 190
                       8***************************98899*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-28125191IPR003657WRKY domain
PROSITE profilePS5081122.056125188IPR003657WRKY domain
SuperFamilySSF1182906.02E-26129191IPR003657WRKY domain
SMARTSM007746.4E-40130192IPR003657WRKY domain
PfamPF031068.5E-27131190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0010150Biological Processleaf senescence
GO:0010193Biological Processresponse to ozone
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MDGGWSFEQK TLISELIQGM EFAKELRGHL TSAPSTEARD VLMQGILSSY EKALLILQWG  60
GPMPQSQPVV AVSGIPESPL SVNGSPRSDE FEKGIGDHQQ NRDISKKRKL MPKWTDQVRI  120
SSENGLEGPH DDGYSWRKYG QKDILGATYP RSYYRCTYRN TQNCWATKQV QRSDEDPTVF  180
EITYRGTHTC GNSGPSVPSP ASSEKQEQKQ INHQSNHHQH LQQQQSQEML SKFRAGLRVD  240
TNNLDNNEKA YHPFSFPSAS VGLLQIEHCS SSTLTNVNSS LFGSFSSTFF SPSTPESCYF  300
SMHQANDLGQ AHNMQHLESD HNEIISTNTS STNSPIMDLE FSLDQVGIDP NFPFDTSFFP  360
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-131311881872Probable WRKY transcription factor 4
2lex_A5e-131311881872Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00850.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055851.10.0PREDICTED: probable WRKY transcription factor 53
SwissprotQ9SUP61e-73WRK53_ARATH; Probable WRKY transcription factor 53
TrEMBLA0A059C2030.0A0A059C203_EUCGR; Uncharacterized protein
STRINGPOPTR_0003s13840.11e-146(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19332783
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.19e-72WRKY family protein